BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009B01SP1|AL425976
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1304 1589 0.0
>3x_Contig1304
Length = 6732
Score = 1589 bits (801), Expect = 0.0
Identities = 802/803 (99%)
Strand = Plus / Plus
Query: 3 agttttctgtgatttttttcattttcttatatctacataagctattaacctatatggaag 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3800 agttttctgtgatttttttcattttcttatatctacataagctattaacctatatggaag 3859
Query: 63 tctatttacatgaagaatccatagcaaggcaagtdattacggtagcaaacattgaatcag 122
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3860 tctatttacatgaagaatccatagcaaggcaagtaattacggtagcaaacattgaatcag 3919
Query: 123 gttttgaaaacttgcaatgcactttctaatttcgtaaacatttcttcccattcaccatcg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3920 gttttgaaaacttgcaatgcactttctaatttcgtaaacatttcttcccattcaccatcg 3979
Query: 183 caggtactgagaaccgtgactgcacctcccgcaccaatctgccaactgtttccttgatcg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3980 caggtactgagaaccgtgactgcacctcccgcaccaatctgccaactgtttccttgatcg 4039
Query: 243 taggaatacatacatctgatgttaacagaccaatctccattcatattagcggaccagtat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4040 taggaatacatacatctgatgttaacagaccaatctccattcatattagcggaccagtat 4099
Query: 303 cctgtcacaccggagtatacacctcttgtggaggagcctagtaagggttcaatctgcgcc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4100 cctgtcacaccggagtatacacctcttgtggaggagcctagtaagggttcaatctgcgcc 4159
Query: 363 tgcaaaagctccacagttttcttctttggtgctccggtcattgaccccggtggtaacgag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4160 tgcaaaagctccacagttttcttctttggtgctccggtcattgaccccggtggtaacgag 4219
Query: 423 tgtttcaaaacatccaatccggagtactttgaatctttcaaatgatgcccacggacaaca 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4220 tgtttcaaaacatccaatccggagtactttgaatctttcaaatgatgcccacggacaaca 4279
Query: 483 ctgaccaattggtagacagttttatactcttctactgacataatttcatcaacagttact 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4280 ctgaccaattggtagacagttttatactcttctactgacataatttcatcaacagttact 4339
Query: 543 tttggtaataactcgtataaatcatttctgatcaagtctaaaatcattaagttttcaccg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4340 tttggtaataactcgtataaatcatttctgatcaagtctaaaatcattaagttttcaccg 4399
Query: 603 aactccttgggggttttcaagatgcatgttgctttctctagatccatatcaggtcctttc 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4400 aactccttgggggttttcaagatgcatgttgctttctctagatccatatcaggtcctttc 4459
Query: 663 ttgactgtcccttttattggtctcaactcgcaagtatcatttgtatacttcaagaatctt 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4460 ttgactgtcccttttattggtctcaactcgcaagtatcatttgtatacttcaagaatctt 4519
Query: 723 tccggagatgtagatattaggcacaaatcgaatttgttctgttctatgtcatcaaattgg 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4520 tccggagatgtagatattaggcacaaatcgaatttgttctgttctatgtcatcaaattgg 4579
Query: 783 aagaaactggaaaacggtgctgg 805
|||||||||||||||||||||||
Sbjct: 4580 aagaaactggaaaacggtgctgg 4602
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6668
Number of Sequences: 1807
Number of extensions: 6668
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)